Comments for Philip W Fowler Computers, biology, proteins Fri, 16 Jan 2023 21:33:00 +0000 hourly 1 http://wordpress.org/?v=4.1.1 Comment on Software Carpentry Workshop in Oxford, Day 1 by Software Carpentry Workshop, Oxford, 13-14 January 2023 | Philip W Fowler /2023/01/13/software-carpentry-workshop-in-oxford-day-1/#comment-171 Fri, 16 Jan 2023 21:33:00 +0000 https://philipwfowler.wordpress.com/?p=317#comment-171 […] some of the comments at the end of day 1 I was a bit concerned about the speed at which we were moving through the material, so I asked […]

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Comment on Software Carpentry Feedback by Software Carpentry Workshop, Oxford, 13-14 January 2023 | Philip W Fowler /2012/11/01/feedback/#comment-71 Fri, 16 Jan 2023 21:32:57 +0000 http://philipwfowler.wordpress.com/2012/11/01/feedback/#comment-71 […] To get a better idea I sent the participants a similar questionnaire to the one I sent to the Software Carpentry workshop I organised before. Nearly all the participants (95%) agreed with the statement “I enjoyed […]

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Comment on Getting an ext3 Drobo 5D to play nicely with Ubuntu 12.04 by GGC /2014/06/25/getting-an-ext3-drobo-5d-to-play-nicely-with-ubuntu-12-04/#comment-161 Sun, 07 Sep 2014 07:43:24 +0000 http://philipwfowler.wordpress.com/?p=263#comment-161 Could you specify which commands require seconds and which require hours/days?
How do I know which commands are actually running and which are simply hanging?

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Comment on Getting an ext3 Drobo 5D to play nicely with Ubuntu 12.04 by Mike Polek /2014/06/25/getting-an-ext3-drobo-5d-to-play-nicely-with-ubuntu-12-04/#comment-151 Mon, 30 Jun 2014 20:09:39 +0000 http://philipwfowler.wordpress.com/?p=263#comment-151 Should have said comment out lines 662-662 of DroboGUI.py to use droboview.

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Comment on Getting an ext3 Drobo 5D to play nicely with Ubuntu 12.04 by Mike Polek /2014/06/25/getting-an-ext3-drobo-5d-to-play-nicely-with-ubuntu-12-04/#comment-141 Mon, 30 Jun 2014 20:08:36 +0000 http://philipwfowler.wordpress.com/?p=263#comment-141 Try commenting out lines 662-664 to get rid of the KeyError messages if you want to use droboview.

# self.Options.SIPCheckBox.setChecked( self.options[‘UseStaticIPAddress’] )
# self.Options.AddrEdit.setText( self.options[‘IPAddress’] )
# self.Options.NetMaskEdit.setText( self.options[‘NetMask’] )

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Comment on Trying to stop lectures from being so zzzz… by Tring to stop lectures from being so zzzz…Part 2 | Philip W Fowler /2014/03/06/trying-to-stop-lectures-from-being-so-zzzz/#comment-131 Fri, 21 Mar 2014 12:55:56 +0000 http://philipwfowler.wordpress.com/?p=226#comment-131 […] Last time, I wrote about the tactics I was planning on trying out in my lecture series this year. Well, the lectures are done, I’ve collected some feedback and so here are the results. […]

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Comment on GROMACS 4.6: Scaling of a very large coarse-grained system by GROMACS 4.6: Running on GPUs | Philip W Fowler /2013/10/23/gromacs-4-6-scaling-of-a-very-large-coarse-grained-system/#comment-111 Tue, 11 Feb 2014 11:53:35 +0000 http://philipwfowler.wordpress.com/?p=129#comment-111 […] in November 2013. For this comparison we will need to use a bigger benchmark, so let’s us the same one as before. It has 9x the number of lipids, but because I had to add extra water ends up being about 15x […]

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Comment on GROMACS 4.6 by GROMACS 4.6: Running on GPUs | Philip W Fowler /2013/10/18/gromacs-4-6/#comment-101 Tue, 11 Feb 2014 11:53:26 +0000 http://philipwfowler.wordpress.com/?p=79#comment-101 […] mentioned before that I would write something on running GROMACS on GPUs. Let’s imagine we want to simulate a […]

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Comment on The Oxford Software Carpentry Boot Camp … one year on. by Software Carpentry Weeks in Review 16 December 2013 – 5 January 2014 | Mozilla Science Lab /2013/12/19/the-oxford-software-carpentry-boot-camp-one-year-on/#comment-121 Wed, 08 Jan 2014 04:12:34 +0000 http://philipwfowler.wordpress.com/?p=191#comment-121 […] One shot of Software Carpentry is not necessarily enough… –Phillip Fowler […]

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Comment on Software Carpentry Feedback by The Oxford Software Carpentry Boot Camp … one year on. | Philip W Fowler /2012/11/01/feedback/#comment-61 Thu, 19 Dec 2013 12:43:10 +0000 http://philipwfowler.wordpress.com/2012/11/01/feedback/#comment-61 […] organised a Software Carpentry Boot Camp at the University of Oxford. I’ve previously posted the feedback I gathered immediately before and after the boot camp, but thought it would be interesting to see […]

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